Reply to BCD3000 & Nanopad Gater Combo - HELP!!

Can anyone suggest a tweak in Traktor or Kontrol (or both) so I can get the above two playing happily together? I'm using Scooby's mapping for the Nanopad, and the Traktor TSI for the BCD3000.

At the moment the Nanopad's x-y is moving the mid & low eqs in Traktor.

I don't know where to start! :eek: